Publications

Please see below for recent publications from members of our department.

• Spatial transcriptomic landscape of invasion patterns in human papillomavirus-associated endocervical adenocarcinoma

  December 1, 2026

  Spatial transcriptomic landscape of invasion patterns in human papillomavirus-associated endocervical adenocarcinoma

  Axelrod, M. L., Zhou, R. & Sun, L., Dec 2026, In: Scientific reports. 16, 1, 13246.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Divergent white matter metabolic signature patterns indicate impending cognitive decline in aging and dementia

  December 1, 2026

  Divergent white matter metabolic signature patterns indicate impending cognitive decline in aging and dementia

  the Alzheimer’s Disease Neuroimaging Initiative, Dec 2026, In: Nature communications. 17, 1, 4152.

  Research output: Contribution to journal › Article › peer-review

  Publication

• The redundant protein synthesis gene Aimp1 challenges the canonical inverse relationship between translation and autophagy

  December 1, 2026

  The redundant protein synthesis gene Aimp1 challenges the canonical inverse relationship between translation and autophagy

  Lee, D. D., Rutkowski, B. N., Wilson, N. C., Kuc, R. D., Schwarz, C. D. & Schwarz, M. A., Dec 2026, In: Communications Biology. 9, 1, 639.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Inducible T-bet deletion reveals tissue-specific requirements in NKp46+ ILC immunobiology and response to murine cytomegalovirus

  December 1, 2026

  Inducible T-bet deletion reveals tissue-specific requirements in NKp46+ ILC immunobiology and response to murine cytomegalovirus

  Wong, P., Paik, Y., Chang, L., Burdi, A., Neal, C., Cubitt, C. C., Tran, J., Bhattarai, B., Morina, L., Marin, N. D., Hwang, K., Sohn, H., Wagner, J. A., Foltz, J. A., Song, W., Schappe, T., Marsala, L., Foster, M., Foster, J. & Elliott, M. & 5 others, Piersma, S. J., Colonna, M., Yokoyama, W. M., Cooper, M. & Fehniger, T. A., Dec 2026, In: Nature communications. 17, 1, 7708.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Transcriptome signatures for the identification of bevacizumab responders in ovarian cancer

  December 1, 2026

  Transcriptome signatures for the identification of bevacizumab responders in ovarian cancer

  Zolotareva, O., Legler, K., Tsoy, O., Esteve, A., Sergushichev, A., Sukhov, V., Baumbach, J., Eylmann, K., Qi, M., Alawi, M., Kommoss, S., Schmalfeldt, B. & Oliveira-Ferrer, L., Dec 2026, In: Genome medicine. 18, 1, 121.

  Research output: Contribution to journal › Article › peer-review

  Publication

• DNA Methylation Signatures of Upper Aerodigestive Tract Squamous Cell Carcinoma and Sarcomatoid Squamous Cell Carcinoma Are Similar: A Potential Novel Diagnostic Tool for the Diagnosis of Sarcomatoid Squamous Cell Carcinoma

  December 1, 2026

  DNA Methylation Signatures of Upper Aerodigestive Tract Squamous Cell Carcinoma and Sarcomatoid Squamous Cell Carcinoma Are Similar: A Potential Novel Diagnostic Tool for the Diagnosis of Sarcomatoid Squamous Cell Carcinoma

  Dermawan, J. K., Griffith, C. C., Starbuck, J., Shurtleff, S., Hattery, T., Nakitandwe, J., Campbell, S., Chrisinger, J. S. A., Chen, M. J., Azzato, E. M. & Fritchie, K. J., Dec 2026, In: Head and Neck Pathology. 20, 1, 89.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Carbapenemase-producing carbapenem-resistant Enterobacterales in surgical intensive care unit patients in a tertiary hospital in India

  December 1, 2026

  Carbapenemase-producing carbapenem-resistant Enterobacterales in surgical intensive care unit patients in a tertiary hospital in India

  Hall, L. R., Benedict, E. E., Edathadathil, F., Jacob, J. J., Suresh, D., Krishna, Y., Varghese, J. A., van Rheenen, J., George, I. A., Kwon, J. H., Olsen, M. A., Vasudevan, A. K., Petersen, E. E., Westercamp, M., Leekha, S., Dantas, G., Veeraraghavan, B., Vayoth, S. O., Singh, S. K. & Warren, D. K. & 1 others, Gandra, S., Dec 2026, In: Nature communications. 17, 1, 7863.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Bone-derived Osterix+ osteolineage cells are a source of tumor-promoting myofibroblastic cancer-associated fibroblasts in breast cancer

  December 1, 2026

  Bone-derived Osterix+ osteolineage cells are a source of tumor-promoting myofibroblastic cancer-associated fibroblasts in breast cancer

  Furesi, G., Zeng, C., Eul, E. M., Zarrer, J., Veis, D. J., Ye, J., Morikis, V. A., Malachowski, T., Khantakova, D., Ulezko Antonova, A., Melam, A., Colonna, M., Hesse, E., Taipaleenmäki, H., Longmore, G. D., Stewart, S. A., Artyomov, M. N. & Faccio, R., Dec 2026, In: Nature communications. 17, 1, 7452.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Intranasal boosting induces variant-specific responses in SARS-CoV-2 vaccine-imprinted mice

  December 1, 2026

  Intranasal boosting induces variant-specific responses in SARS-CoV-2 vaccine-imprinted mice

  Liang, C. Y., Scheaffer, S. M., Case, J. B., Dmitriev, I. P., Li, Y., Malladi, S. K., Liu, X., Ying, B., Desai, P., Whelan, S. P. J., Curiel, D. T., Ellebedy, A. H. & Diamond, M. S., Dec 2026, In: Nature communications. 17, 1, 8056.

  Research output: Contribution to journal › Article › peer-review

  Publication

• ADAM10-dependent disruption of N-cadherin and ventricular zone in post-hemorrhagic hydrocephalus

  November 1, 2026

  ADAM10-dependent disruption of N-cadherin and ventricular zone in post-hemorrhagic hydrocephalus

  Castaneyra-Ruiz, L., Garcia-Bonilla, M., Isaacs, A. M., Morales, D. M., Otun, A., Michenkova, M., Zwick, S. H., Wardenburg, J. B., Paulson, J. N., Castaneyra-Perdomo, A., Dahiya, S. M., Ge, X., McAllister, J. P. & Limbrick, D. D., Nov 2026, In: Experimental Neurology. 405, 115941.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Circulating lipids are related to longitudinal changes of ATN biomarkers for Alzheimer’s disease

  September 1, 2026

  Circulating lipids are related to longitudinal changes of ATN biomarkers for Alzheimer’s disease

  Alzheimer’s Disease Neuroimaging Initiative & Alzheimer’s Disease Metabolomics Consortium (ADMC), Sep 2026, In: Molecular Psychiatry. 31, 9, p. 5395-5408 14 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• All Together Now

  September 1, 2026

  All Together Now

  Jafari, P., Husain, A. N. & Setia, N., Sep 2026, In: Clinics in Laboratory Medicine. 46, 3, p. 577-606 30 p.

  Research output: Contribution to journal › Review article › peer-review

  Publication

• Ectopic Splenic Tissue: Diagnostic Challenges in Limited Samples and Intraoperative Consultations

  August 1, 2026

  Ectopic Splenic Tissue: Diagnostic Challenges in Limited Samples and Intraoperative Consultations

  Escobar, D., Shalaby, A., Liu, X., Zhang, X., Rytych, J., Liao, X., Zand, A., Ziebell, J., Esnakula, A. K., Chen, X., Ding, X., Zheng, W., Wang, H. L., Lee, H., Westeroff, M. & Xue, Y., Aug 2026, In: International Journal of Surgical Pathology. 34, 5, p. 1098-1105 8 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Diagnostic stewardship perceptions and practices among microbiology laboratories: a national survey from the American Society for Microbiology

  August 1, 2026

  Diagnostic stewardship perceptions and practices among microbiology laboratories: a national survey from the American Society for Microbiology

  She, R. C., Larkin, P., Parrott, J. S., Tom, R., Dumm, R. E., Patterson, L. & Filkins, L. M., Aug 2026, In: Journal of clinical microbiology. 64, 8, e00239-26.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Rift Valley fever virus infects trophoblast cell lines in an LRP1-dependent manner

  August 1, 2026

  Rift Valley fever virus infects trophoblast cell lines in an LRP1-dependent manner

  Rush, R. E., Price, D. A., McMillen, C. M., Donermeyer, D. L., Leung, D., Amarasinghe, G. K. & Hartman, A. L., Aug 1 2026, In: The Journal of general virology. 107, 8

  Research output: Contribution to journal › Article › peer-review

  Publication

• Deep Inferior Epigastric Perforator Flap Reconstruction of Breast Necrobiosis Lipoidica

  August 1, 2026

  Deep Inferior Epigastric Perforator Flap Reconstruction of Breast Necrobiosis Lipoidica

  Saoud, K., Boukind, A., Chapagain, U., Crumley, S., Almourani, R. & Myckatyn, T. M., Aug 2026, In: Plastic and Reconstructive Surgery – Global Open. 14, 8, p. e8059

  Research output: Contribution to journal › Article › peer-review

  Publication

• Individualised treatment effects of corticosteroids in IgA nephropathy

  August 1, 2026

  Individualised treatment effects of corticosteroids in IgA nephropathy

  VALIGA investigators & CureGN investigators, Aug 2026, In: EBioMedicine. 130, 106396.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Two differentiation pathways generate large peritoneal macrophages with one replenishing mesothelial border macrophages

  July 31, 2026

  Two differentiation pathways generate large peritoneal macrophages with one replenishing mesothelial border macrophages

  Han, J., Gallerand, A., Mintz, R. L., Chen, J., Ou, F., Gao, S., Lee, D., Chan, M. M., Harmon, M. T., Lin, X., Ramkhelawon, B., Huckstep, C. G., Strickland, M. R., Liu, T., Lavine, K. J., Schilling, J., Morley, S., Zinselmeyer, B. H., Murphy, K. & Randolph, G. J., Jul 31 2026, In: Science immunology. 11, 121, p. eaeg8653

  Research output: Contribution to journal › Article › peer-review

  Publication

• TGF-β signaling promotes astroglial activation and TDP-43 proteinopathy in organoid models of frontotemporal lobar degeneration

  July 15, 2026

  TGF-β signaling promotes astroglial activation and TDP-43 proteinopathy in organoid models of frontotemporal lobar degeneration

  Ramsey, A. C., Tang, X. Y., Macias, M. J., Nano, P. R., Lu, R., Benito, B., Lau, C. M., Park, J., Zhang, J., Beatty, W., Mukhtar, T., Kriegstein, A. R., Bhaduri, A., Marsan, E. & Huang, E., Jul 15 2026, In: The Journal of clinical investigation. 136, 14

  Research output: Contribution to journal › Article › peer-review

  Publication

• Gut microbe-derived short-chain fatty acids regulate alphavirus arthritis and macrophage activation in mice

  July 15, 2026

  Gut microbe-derived short-chain fatty acids regulate alphavirus arthritis and macrophage activation in mice

  Zhao, R. F., Kleverov, M., Winkler, E. S., Williams, R. B., Janova, H., Droit, L., Wang, L., Li, T. T., Heath, L., Jung, A., Mack, M., Baldridge, M. T., Stappenbeck, T., Thackray, L. B., Hsieh, C., Handley, S. A., Guo, C. J., Fischbach, M. A., Artyomov, M. N. & Diamond, M., Jul 15 2026, In: The Journal of clinical investigation. 136, 14

  Research output: Contribution to journal › Article › peer-review

  Publication