Publications

Please see below for recent publications from members of our department.

• Cell type-specific enhancers regulate IL-22 expression in innate and adaptive type 3 lymphoid cells

  December 1, 2026

  Cell type-specific enhancers regulate IL-22 expression in innate and adaptive type 3 lymphoid cells

  Saini, A., Hopkins, L. S., Serna, V. A., McCullen, M. V. D., Selner, N. G., Bhattarai, B., Fachi, J. L., Glynn, R. A., Hayer, K. E., Bassing, C. H., Colonna, M. & Oltz, G., Dec 2026, In: Nature communications. 17, 1, 3960.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Neuroendocrine Tumors of the Gallbladder: A Multicenter Case Series and Systematic Literature Review Indicating Predominantly Non-Aggressive Tumor Behavior and a Common Association with Cholesterol Polyps and Cholesterolosis

  December 1, 2026

  Neuroendocrine Tumors of the Gallbladder: A Multicenter Case Series and Systematic Literature Review Indicating Predominantly Non-Aggressive Tumor Behavior and a Common Association with Cholesterol Polyps and Cholesterolosis

  Vanoli, A., Xue, Y., Kasajima, A., Ruffoni, R., Tarcan, Z. Ç., Tezcan, N., Liu, X., Navale, P., Mohamed, A., Gullo, I., Silva, R., Vocino Trucco, G., Volante, M., Disanto, M. G., Taverna, C., Kuzucular, E., Luchini, C., Roa, J. C., Esposito, I. & La Rosa, S. & 5 others, Pehlivanoglu, B., Reid, M., Klöppel, G., Basturk, O. & Adsay, V., Dec 2026, In: Endocrine Pathology. 37, 1, 26.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Spatial transcriptomic landscape of invasion patterns in human papillomavirus-associated endocervical adenocarcinoma

  December 1, 2026

  Spatial transcriptomic landscape of invasion patterns in human papillomavirus-associated endocervical adenocarcinoma

  Axelrod, M. L., Zhou, R. & Sun, L., Dec 2026, In: Scientific reports. 16, 1, 13246.

  Research output: Contribution to journal › Article › peer-review

  Publication

• The redundant protein synthesis gene Aimp1 challenges the canonical inverse relationship between translation and autophagy

  December 1, 2026

  The redundant protein synthesis gene Aimp1 challenges the canonical inverse relationship between translation and autophagy

  Lee, D. D., Rutkowski, B. N., Wilson, N. C., Kuc, R. D., Schwarz, C. D. & Schwarz, M. A., Dec 2026, In: Communications Biology. 9, 1, 639.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Divergent white matter metabolic signature patterns indicate impending cognitive decline in aging and dementia

  December 1, 2026

  Divergent white matter metabolic signature patterns indicate impending cognitive decline in aging and dementia

  the Alzheimer’s Disease Neuroimaging Initiative, Dec 2026, In: Nature communications. 17, 1, 4152.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Bone-derived Osterix+ osteolineage cells are a source of tumor-promoting myofibroblastic cancer-associated fibroblasts in breast cancer

  December 1, 2026

  Bone-derived Osterix+ osteolineage cells are a source of tumor-promoting myofibroblastic cancer-associated fibroblasts in breast cancer

  Furesi, G., Zeng, C., Eul, E. M., Zarrer, J., Veis, D. J., Ye, J., Morikis, V. A., Malachowski, T., Khantakova, D., Ulezko Antonova, A., Melam, A., Colonna, M., Hesse, E., Taipaleenmäki, H., Longmore, G. D., Stewart, S. A., Artyomov, M. N. & Faccio, R., Dec 2026, In: Nature communications. 17, 1, 7452.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Ectopic Splenic Tissue: Diagnostic Challenges in Limited Samples and Intraoperative Consultations

  August 1, 2026

  Ectopic Splenic Tissue: Diagnostic Challenges in Limited Samples and Intraoperative Consultations

  Escobar, D., Shalaby, A., Liu, X., Zhang, X., Rytych, J., Liao, X., Zand, A., Ziebell, J., Esnakula, A. K., Chen, X., Ding, X., Zheng, W., Wang, H. L., Lee, H., Westeroff, M. & Xue, Y., Aug 2026, In: International Journal of Surgical Pathology. 34, 5, p. 1098-1105 8 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Individualised treatment effects of corticosteroids in IgA nephropathy

  August 1, 2026

  Individualised treatment effects of corticosteroids in IgA nephropathy

  VALIGA investigators & CureGN investigators, Aug 2026, In: EBioMedicine. 130, 106396.

  Research output: Contribution to journal › Article › peer-review

  Publication

• IL-13 signaling in cDC2 is required for systemic anaphylactic responses

  July 14, 2026

  IL-13 signaling in cDC2 is required for systemic anaphylactic responses

  Harada, Y., Sasaki, T., Obata-Ninomiya, K., Matsuyama, T., Ueha, S., Shichino, S., Watanabe, T., Ogawa, S., Ki, S., Suzuki, Y., Ito, N., Motomura, Y., Ueno, H., Ziegler, S. F., Inoue, H., Burrows, P., Kim, B. S., Murphy, K. M. & Kubo, M., Jul 14 2026, In: Proceedings of the National Academy of Sciences of the United States of America. 123, 28, e2608478123.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Prolonged KRAS-MAPK Inhibition Induces Interferon Signaling That Promotes Cell State Transition and Confers Therapeutic Vulnerabilities

  July 2, 2026

  Prolonged KRAS-MAPK Inhibition Induces Interferon Signaling That Promotes Cell State Transition and Confers Therapeutic Vulnerabilities

  Bulle, A., Chen, Y., Li, H., Chen, T. H. P., Khawar, I. A., Li, L., Wang, Y., Liu, P., Somani, V. K., Kurupi, R., Geng, Y., Pereye, O. B., Bansod, S., Le, S. B., Ruzinova, M., Tran, D. D. & Lim, K. H., Jul 2 2026, In: Cancer research. 86, 13, p. 3270-3286 17 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• The Effect of Optimizing Urine Drug Screening Panels at Two Academic Medical Centers

  July 1, 2026

  The Effect of Optimizing Urine Drug Screening Panels at Two Academic Medical Centers

  Mahowald, G. K., Kang, P., Chai, P. R., Erickson, T. B., Chin, A. C., Tolan, N. V., Uljon, S. & Melanson, S. E. F., Jul 2026, In: Journal of Applied Laboratory Medicine. 11, 4, p. 748-757 10 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• BPTF is essential for vaccine-induced germinal center B cell responses

  June 7, 2026

  BPTF is essential for vaccine-induced germinal center B cell responses

  Sturtz, A. J., Evavold, B. K., Heidari Rarani, Z., Alsoussi, W. B., Zhou, J. Q., Matz, H. C., Muramatsu, H., Simkins, W., Kumar Malladi, S., McIntire, K. M., Das, J., Turner, J., Pardi, N. & Ellebedy, A. H., Jun 7 2026, In: Journal of immunology (Baltimore, Md. : 1950). 215, 6

  Research output: Contribution to journal › Article › peer-review

  Publication

• Perianal fistulising Crohn disease-associated malignancy: a multi-institutional study of histology, clinical features, and outcomes

  June 1, 2026

  Perianal fistulising Crohn disease-associated malignancy: a multi-institutional study of histology, clinical features, and outcomes

  Navale, P., Toro, P., Hu, S., Wen, K. W., Liao, X., Zhang, D., Alpert, L. & Liu, X., Jun 2026, In: Pathology. 58, 4, p. 393-398 6 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Innate lymphoid cells in rheumatoid arthritis as mediators of pathology and resolution

  June 1, 2026

  Innate lymphoid cells in rheumatoid arthritis as mediators of pathology and resolution

  Kabil, A. K., Kuo, I. C., Colonna, M. & McNagny, K. M., Jun 2026, In: Nature Reviews Rheumatology. 22, 6, p. 390-402 13 p.

  Research output: Contribution to journal › Review article › peer-review

  Publication

• Histopathologic Evaluation and Reporting in Inflammatory Bowel Disease: A Consensus Document Sponsored by the Rodger C. Haggitt Gastrointestinal Pathology Society

  June 1, 2026

  Histopathologic Evaluation and Reporting in Inflammatory Bowel Disease: A Consensus Document Sponsored by the Rodger C. Haggitt Gastrointestinal Pathology Society

  GIPS IBD Review Panel, Jun 2026, In: Modern Pathology. 39, 6, 101002.

  Research output: Contribution to journal › Review article › peer-review

  Publication

• Neocortical tau burden determines the degree of cognitive impairment in individuals with Braak stage V neurofibrillary degeneration

  June 1, 2026

  Neocortical tau burden determines the degree of cognitive impairment in individuals with Braak stage V neurofibrillary degeneration

  Richardson, T. E., Cherry, J., Kandoi, S., Rohde, S. K., Uretsky, M., Tuz-Zahra, F., Bieniek, K. F., Farrell, K., Hefti, M. M., Miller, M. B., Tripodis, Y., Stein, T. D., Maldonado-Díaz, C., Hiya, S., Beach, T. G., Corrada, M. M., Dugger, B. N., Flanagan, M. E., Frosch, M. P. & Gearing, M. & 22 others, Grinberg, L. T., Hansen, L. A., Hawes, D., Head, E., Keene, C. D., Kofler, J., Lee, E. B., Nelson, P. T., Oakley, D. H., Perrin, R. J., Rissman, R. A., Salamat, S., Schneider, J. A., Serrano, G. E., Teich, A. F., Troncoso, J. C., Wisniewski, T., Woltjer, R. L., Crary, J. F., Dickson, D. W., McKee, A. C. & Walker, J. M., Jun 2026, In: Acta Neuropathologica. 151, 1, 61.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Shared and distinct molecular signatures of resistance to different endocrine therapies (Alliance A011106).

  June 1, 2026

  Shared and distinct molecular signatures of resistance to different endocrine therapies (Alliance A011106).

  Anurag, M., Dou, Y., Hoog, J., Holloway, K., Williams, L., Kim, B. J., Sanati, S., Vij, K. R., Fernandez-Martinez, A., Fan, C., Korchina, V., Gibbs, R., Watson, M. A., Suman, V. J., Partridge, A. H., Zhang, B., Ellis, M. J., Carey, L. A., Perou, C. & Ma, C. X., Jun 2026, In: Journal of Clinical Oncology. 44, 16, p. 566 1 p.

  Research output: Contribution to journal › Article › peer-review

  Publication

• Contributions of the Alzheimer's Disease Neuroimaging Initiative to advancing AD research: a targeted review of recent publications

  June 1, 2026

  Contributions of the Alzheimer’s Disease Neuroimaging Initiative to advancing AD research: a targeted review of recent publications

  for the Alzheimer’s Disease Neuroimaging Initiative, Jun 2026, In: Alzheimer’s and Dementia. 22, 6, e71566.

  Research output: Contribution to journal › Review article › peer-review

  Publication

• Corrigendum to “Efficacy of Chinese medicine WW-1 in managing gastric atrophy and intestinal metaplasia in patients with chronic atrophic gastritis: A multicenter, randomized, double-blind, placebo-controlled trial” [Pharmacol. Res. 227 (2026) 108176] (Pharmacological Research (2026) 227, (S1043661826000915), (10.1016/j.phrs.2026.108176))

  June 1, 2026

  Corrigendum to “Efficacy of Chinese medicine WW-1 in managing gastric atrophy and intestinal metaplasia in patients with chronic atrophic gastritis: A multicenter, randomized, double-blind, placebo-controlled trial” [Pharmacol. Res. 227 (2026) 108176] (Pharmacological Research (2026) 227, (S1043661826000915), (10.1016/j.phrs.2026.108176))

  Yang, Y., Qin, Z., Du, S., Fang, S. S., Ma, Y., Liu, Z., Zhou, W., Liu, X., Tay, A. C. Y., Tang, Y., Wang, C., Su, J., Liu, F., Shu, J., Tian, X., Yang, Q., Liu, H., Liu, L., Yu, T. & Li, Z. & 8 others, Zhang, Z., Li, Y., Wang, X., Xiong, G., Liu, J., Duan, D. D., Zhang, P. & Wei, W., Jun 2026, In: Pharmacological Research. 228, 108262.

  Research output: Contribution to journal › Comment/debate

  Publication

• Efficacy of Chinese medicine WW-1 in managing gastric atrophy and intestinal metaplasia in patients with chronic atrophic gastritis: A multicenter, randomized, double-blind, placebo-controlled trial

  May 1, 2026

  Efficacy of Chinese medicine WW-1 in managing gastric atrophy and intestinal metaplasia in patients with chronic atrophic gastritis: A multicenter, randomized, double-blind, placebo-controlled trial

  Yang, Y., Qin, Z., Du, S., Fang, S. S., Ma, Y., Liu, Z., Zhou, W., Liu, X., Tay, A. C. Y., Tang, Y., Wang, C., Su, J., Liu, F., Shu, J., Tian, X., Yang, Q., Liu, H., Liu, L., Yu, T. & Li, Z. & 8 others, Zhang, Z., Li, Y., Wang, X., Xiong, G., Liu, J., DUAN, D. D., Zhang, P. & Wei, W., May 2026, In: Pharmacological Research. 227, 108176.

  Research output: Contribution to journal › Article › peer-review

  Publication